Genetics and Genomics
I would very much appreciate
recommendations for additions to this collection.
Careers
- Bioinformatics Job Web Site
Resources at UCI and other UCs
- UCI Chromosome 5 Genome Center
- Human Genome Project Working Draft
- Protein Science
Journals and Publications
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Online Journal of Bioinformatics
- The Human Genome (Science magazine)
- Genetics Websites (Nature)
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EBI BioInformer newsletter
Genome centers and services
US Human Genome Centers
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DOE Human Genome Program Home Page
- Stanford Human Genome Center
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Caltech Genome Research Laboratory
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Philadelphia Genome Center
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LLNL Human Genome Center
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Center for Human Genome Studies LANL
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Baylor College of Medicine Human Genome Center
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Baylor Search Launcher
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Univ. Houston Internet Multiple Sequence Alignment Service
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LBL Human Genome Center
International Human Genome Centers
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Genethon Human Genome Center
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UK Chromosome 9 Home Page
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Genome Analysis Laboratory (Imperial Cancer Research Fund, London)
- UK Medical Research Council Human Genome Program
- GenomeWeb at HGMP
- Genome Databases
Other Genome-related projects
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CPROP Maps of Human Chromosomes
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W.M. Keck Center for Genome Informatics (Texas A&M)
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Saccharomyces Genomic Information Resource (Stanford)
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Dog Genome Project (Berkeley)
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Jackson Laboratory Mouse Genome Server (Bar Harbor, Maine)
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Whitehead Inst. Biomed. Rsch./MIT Ctr. for Genome Rsch. (Mouse Genome)
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National Agricultural Library: MaizeDB (USDA)
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Agricultural Genome World Wide Web Server (USDA)
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Washington University Institute for Biomedical Computing
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Resource for Molecular Cytogenetics (LBL)
NCBI Network Services for Genetics and Genomics
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The National Center for Biotechnology Information Home Page
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BankIt, NCBI's WWW-based Genbank sequence submission service
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NCBI Databases Home Page (dbEST, RefSeq, PubMed)
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NCBI Entrez Home Page
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NCBI BLAST Home Page
- NCBI Genomic
Biology page (including link to new Map Viewer)
Network Services, Software, and Tools
- Bioinformatics at
University of Cambridge (BLAST, Fasta)
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RNA Structure Image Library (Jena, Germany)
- IBM's Bioinformatics and Pattern Discovery Group
- Engines for Pattern Discovery (TEIRESIAS),
Multiple Sequence Alignment (MUSCA), Homology Search (DELPHI)
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ProteomicsSURF
- A Research Pointer to the Proteomics and Scientific Computing Resources!
(Proteomics, Bioinformatics, Genomics, Microarrays, PCR,
Crystallography, NMR, Chromatography, Electrophoresis..)
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WebPlasmid
- A free plasmid drawing software
- Bioinformatics.org -- The Open Lab
- EMBOSS -- The European Molecular Biology Open Software Suite
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Baylor Molecular Genetics Search Launcher
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KUMC Genetics Education Center
- Softberry Genome Explorer (FGENESH++)
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CBI - EMBNet China National Node, Centre of BioInformatic at Peking Univ.
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SEQNET - EMBNet UK National Node, Daresbury Laboratory
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EBI - European Bioinformatics Institute
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Sanger Centre - UK Genome Research Centre
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YAC data searches (Genethon)
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Sequence Analysis (Harvard)
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Sequence Annotation Server (Baylor)
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E. coli Genetic Stock Center (Yale)
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Portable Dictionary of the Mouse Genome (U. Texas)
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Chromosome 4 FTP site (Stanford)
- From Cold Spring Harbor:
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GT, the Genome Topographer and
GDB/Accessor
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EMBNet - European Molecular Biology Network
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GSDB: Submit your sequences via the Web ("WebSub")
- Tools for Molecular Biologists
- Queens University, Canada collection
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GenoBase World Wide Web Server (NIH)
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The BioSCAN Project
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UW Pathology Cytogenetics Resources and Genome Project Tools
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Oak Ridge Natl. Labs: GenQuest, Grail
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Natl Center for Genome Resources: SIGMA, GSDB
Libraries, Collections, and Databases
- Gene Ontology
- The goal of the Gene OntologyTM Consortium is to produce a dynamic controlled vocabulary that can be applied to all eukaryotes even as knowledge of gene and protein roles in cells is accumulating and changing.
- WWW Virtual Library: Model Organisms
- elegansNet
- Research Menu Hubsite for Biomedical Scientists
- BioWurld
- BioWurld, a free service supported by a grant from EMBnet,
is a semi-automated collection of
categorised resources (web sites) in the field of BioInformatics
and Molecular Biology
- DoubleTwist
- DoubleTwist.com provides scientists with a secure point-and-click research environment for accelerating gene discovery.
- BioCompare
- Biocompare bills itself as The Consumer Guide for the Life
Scientist. It appears to be a comparative shopping service
for research in the life sciences.
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Biomolecule Database Access (Harvard)
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Harvard Biological Laboratories Genome Information
- EMBnet (Switzerland)
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Chromosome 22 Database (Philadelphia)
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EcoCyc: Encyclopedia of E. coli Genes and Metabolism (SRI Intl.)
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E.coli Gene Database (MBL)
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GDB (Genome Data Base)
and
Database technology behind GDB v6.0
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Protein Data Bank (PDB)
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TRANSFAC Transcription Factors database (FTP)
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Eugene McDermott Center for Human Growth and
Development Online Data (Southwestern)
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QUEST Protein Database Center
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The Swiss Node of the European Molecular Biology Network
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The Norwegian Node of the European Molecular Biology Network
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Finnish Selectable Image with access to EMBL information
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German site for European Bioinformatics Institute (EBI)
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CEPH-Genethon integrated map
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UK site for European Bioinformatics Institute (EBI)
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ExPASy (Geneva University Hospital and the University of Geneva)
Some select meetings and events
- Report of the NIH Model Organism Database Workshop (1998)
- Cold Spring Harbor Laboratory Meetings and Courses
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Fly meetings
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Human genome and biotechnology meetings calendar
- Gordon Research Conferences
- Keystone Symposia
Other Government Biomedical WWW Services
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Human Genome Management Information System (HGMIS) at ORNL
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DIMACS 1994-95 Special Year in Mathematical Support for
Molecular Biology
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HyperDOC: A Multimedia/Hypertext Resource of the NLM
- NIH Home Page
- NIH Model Organisms Page
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NIH Molecular Modeling WWW Service
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Molecules R Us (NIH)
Other Lists of Life Science WWW links
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RNA World (Institut fuer Molekulare Biotechnologie, Jena, Germany)
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Biologists' Web Resource Page (LBL HGC)
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Cambridge Healthtech Institute's Biomedical Resource Page
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Australia Natl. Univ.
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Johns Hopkins list of Biology WWW Resources
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USGS list of Biology Servers
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U. Texas Medical Branch Structural and Molecular Biology Resources
wiedeman@uci.edu